- v353 Preview 1 - 24 July 2017
- v353 Preview 2 - 31 July 2017
- v353 Final - 7 Aug 2017
Code changes:
- Hub search now ignores empty supertracks and provides better links to composite tracks. It also now requires all search terms to be found instead of just any search term, but supports term expansion (so, e.g., "H3K4ME" matches H3K4ME1, H3K4ME2, and H3K4ME3) (#19758). Jonathan
- Added hgFakeAgp and hgBbiDbLink to userApps (#19843). Hiram
- Fixes for gbib: crispr (#19789). Max
- Fix for hgTracks highlights move at the end of chromosomes (#19911). Max
- Fix dagre javascript library broken over https (#19855). Max
- Fix for Track UI popup moves around when Apply button used (#16948). Kate
- Styling change: moved some styling (section headers) to gb.css to support use in CGIs. Kate
- Initial check-in of hgCollect CGI, which builds track collections (#11630). Brian
- Slightly modified snake track display with Joel's code to draw number of bases for inserts in hgTracks (#19963). Brian
- Fix for refSeqGet to use hgFixed as part of Genbank Table Migration phase III. Brian
- Fix for hgTables for refGene selection from hg19 to hg38, in hg19 it is a top-level track, but in hg38 refGene is a subtrack of refSeqComposite so findSelectedTrack needs to return refSeqComposite (#19920). Angie
- Fix for hgTables for root names of split table sets, e.g. intronEst for chr*_intronEst, that were falling into the !hTableExists check in maybeGetHti and were mistakenly given hti with root name as table name (#19930). Angie
- Added support for "chr" sequence names in HGVS genomic (g.) terms (#19832). Angie
Data changes:
- Edits to the GTEx supertrack trackDb settings and html (#19350). Chris E.
- Cleaned up the COSMIC trackDb settings and html, added in files for version 81 (#19932). Chris E.
- Added browser for sequence: susScr11 - pig (#19859). Hiram
- Added browser for sequence: oreNil3 - Nile tilapia (#19879). Hiram
- Added browser for sequence: staAur1 - Staphylococcus aureus (#19937). Hiram
- Added snpedia track for hg19 (#19811). Max
- Hiding not existing interactions problem in interactions track (#19938). Max
- Ongoing work on GTEx eQTL SNP tracks (#15646). Kate