v429

Code changes:

• Sessions must now have a description before they can be added to the Public Sessions listing (#21229). Jonathan
• Added chromAlias support to BAM display (#29109). Braney
• Enabled density coverage mode for PSL tracks. Braney
• Working up new chromAlias format (#29109). Hiram
• Added chromAlias.bigBed file to GenArk hubs (#29111). Hiram
• Added scripts to construct custom track test files for chromAlias (#29111). Hiram
• Added bpt indexes for 2bit files to GenArk hubs (#28961). Hiram
• Fixed up track group names for GenArk hubs (#28961). Hiram
• Fixed bug with bigBed filters that broke "ByRange" filters (#29188). Braney
• Allow big* tracks with only a bigDataUrl to be used in Extended DNA (#15460). Braney
• Removed a check that prevented logo display on wiggles with small values (#28499). Braney
• Fixed bug in table dumps of custom tracks on assembly hubs. Braney
• Session descriptions are now HTML-encoded when being displayed (#29086). Jonathan
• Fixed hgVai corner cases found by running on all ENA variants for bosTau9 (loss of stop codon with no annotated 3'UTR, memory allocation error when joining database table and file). Angie
• Fixed hgVai bug where the position filter resets the result buffer which was initialized previously, and also handle NULL mysql resultset better. Chris
• Continued updates to hgPhyloPlace. Angie

Data changes:

• (New) lastz/chainNet track for hg19/hg38 that runs between all of: hg19 hg38 CHM32 HG002 pat, HG002 mat (#28907). Hiram
• Ongoing improvements to wuhCor1 big tree build process. Angie